Rangan Sukumar from ORNL presented this talk at the HPC User Forum in Tucson. “ORiGAMI is a tool for discovering and evaluating potentially interesting associations and creating novel hypothesis in medicine. ORiGAMI will help you “connect the dots” across 70 million knowledge nuggets published in 23 million papers in the medical literature. The tool works on a ‘Knowledge Graph’ derived from SEMANTIC MEDLINE published by the National Library of Medicine integrated with scalable software that enables term-based, path-based, meta-pattern and analogy-based reasoning principles.”
“This talk will present RDMA-based designs using OpenFabrics Verbs and heterogeneous storage architectures to accelerate multiple components of Hadoop (HDFS, MapReduce, RPC, and HBase), Spark and Memcached. An overview of the associated RDMAenabled software libraries being designed and publicly distributed as a part of the HiBD project.”
Hadoop and Spark clusters have a reputation for being extremely difficult to configure, install, and tune, but help is on the way. The good folks at Cluster Monkey are hosting a crash course entitled Apache Hadoop with Spark in One Day. “After completing the workshop attendees will be able to use and navigate a production Hadoop cluster and develop their own projects by building on the workshop examples.”
If you are in the Northwest and you happen to like surf and turf, have I got a deal for you! Dell is hosting a series of Big Data lunch events in Seattle and Portland at the end of April. On April 26, Dell brings the event to Blueacre Seafood in Seattle. In Portland, lunch is on April 27 at the mighty Fogo de Chao, a Brazilian steak house for the Where’s the Beef? crowd. They’re also coming to Flemings in Salt Lake City on April 28.
The 2016 ALCF Data Science Program (ADSP) at Argonne has issued its Call for Proposals. The new initiative is targeted at “big data” science problems that require the scale and performance of leadership resources. “Our goal is to help explore and improve a variety of computational methods that will help enable data-driven discoveries across all scientific disciplines,” said ALCF Director of Science Katherine Riley.
The STFC Hartree Centre in the UK will host a Hackathon for coders, developers, designers, entrepreneurs and start-ups in May. The event will take place May 18-20 at the Hartree Centre in Cheshire. In partnership with IBM Watson, the Hartree Hack will put the latest cognitive technologies directly into the hands of attendees. Participants will learn from the experts about what IBM Watson APIs (application programming interfaces) can offer them and how to use them, create their first cognitive app and compete to win £25k of support from STFC to propel their idea forward to a market reality over just three days.
Even though it’s a new generation fabric, Intel OPA is still backwards compatible with the many applications in the HPC community that were written using the OpenFabrics Alliance* software stack for InfiniBand. So, existing InfiniBand users will be able to run their codes that are based on the OpenFabrics Enterprise Distribution (OFED) software on Intel OPA. Additionally, Intel has open sourced the key software elements of their fabric to allow integration of Intel OPA into the OFED stack, which several Linux* distributions include in their packages.
Today Italy’s A3Cube announced the F-730 Family of EXA-Converged parallel systems built on Dell servers and achieving sub-microsecond latency through bare metal data access. “A3Cube’s EXA-Converged infrastructure represents the next step in the evolution of converged systems”, said Emilio Billi, A3Cube’s CTO, “while keeping and improving on the scalability and resilience of Hyper-Converged infrastructure. It is engineered to converge all system resources and provide parallel data access and inter node communication at the bare metal level, eliminating the need for, and the limits of, traditional Hyper-converged systems. The system can efficiently use all the fastest storage devices currently on the market or planned to come to market, and puts all existing solutions in the rear view mirror.”
In this TACC Podcast, Jorge Salazar reports that scientists and engineers at the Texas Advanced Computing Center have created Wrangler, a new kind of supercomputer to handle Big Data.
“As a research area, quantum computing is highly competitive, but if you want to buy a quantum computer then D-Wave Systems, founded in 1999, is the only game in town. Quantum computing is as promising as it is unproven. Quantum computing goes beyond Moore’s law since every quantum bit (qubit) doubles the computational power, similar to the famous wheat and chessboard problem. So the payoff is huge, even though it is expensive, unproven, and difficult to program.”