Anton 2 at PSC for Coronavirus Binding Simulation, COVID-19 Test Development

A team at the University of Arkansas is using the Pittsburgh Supercomputing Center’s Anton 2 system to simulate molecular systems for microseconds or longer to investigate how the Coronavirus that causes COVID-19 attaches to human cells, PSC reported. Anton 2, developed by privately held D. E. Shaw Research (DESRES) of New York, is a special-purpose, […]

COVID Camouflage: TACC’s Frontera Reveals Virus’s ‘Sugar Coating’

Researchers using the Frontera supercomputer at the Texas Advanced Computing Center (TACC) have uncovered the atomic makeup of the sugary shield on the coronavirus that could prove instrumental to the workings of the contagion, now spreading death, illness and economic destruction around the world. UCSD scientists have used about 2.3 million Frontera node hours for molecular dynamics simulations and modeling. 

insideHPC Special Report: HPC and AI for the Era of Genomics – Part 3

This special report sponsored by Dell Technologies, takes a deep dive into HPC and AI for life sciences in the era of genomics. The report also highlights a lineup of Ready Solutions created by Dell Technologies which are highly optimized and tuned hardware and software stacks for a variety of industries. The Ready Solutions for HPC Life Sciences have been designed to speed time to production, improve performance with purpose-built solutions, and scale easier with modular building blocks for capacity and performance.

San Diego Supercomputer Center Leverages Bright Cluster Manager in New Expanse Supercomputer

Bright Computing, a global leader in Linux Cluster automation and management software for HPC and machine learning, announced that the San Diego Supercomputer Center (SDSC) at the University of California San Diego will be using Bright Cluster Manager to manage the facility’s newest supercomputer, called ‘Expanse’. The Bright Cluster Manager software platform will enable Expanse to balance and manage resource diversity across virtually all domains of their science and engineering users, maximizing resource utilization and increasing workload efficiency for research scientists across the country and beyond.

insideHPC Special Report: HPC and AI for the Era of Genomics – Part 2

This special report sponsored by Dell Technologies, takes a deep dive into HPC and AI for life sciences in the era of genomics. The report also highlights a lineup of Ready Solutions created by Dell Technologies which are highly optimized and tuned hardware and software stacks for a variety of industries. The Ready Solutions for HPC Life Sciences have been designed to speed time to production, improve performance with purpose-built solutions, and scale easier with modular building blocks for capacity and performance.

insideHPC Special Report: HPC and AI for the Era of Genomics

This special report sponsored by Dell Technologies, takes a deep dive into HPC and AI for life sciences in the era of genomics. The report also highlights a lineup of Ready Solutions created by Dell Technologies which are highly optimized and tuned hardware and software stacks for a variety of industries. The Ready Solutions for HPC Life Sciences have been designed to speed time to production, improve performance with purpose-built solutions, and scale easier with modular building blocks for capacity and performance.

NVIDIA Gives COVID-19 Researchers Free Access Genome-sequencing software for GPUs

NVIDIA is offering COVID-19 Researchers free access to Parabricks genome-sequencing software for GPUs. “Starting today, NVIDIA will provide a free 90-day license to Parabricks to any researcher in the worldwide effort to fight the novel coronavirus. Based on the well-known Genome Analysis Toolkit, Parabricks uses GPUs to accelerate by as much as 50x the analysis of sequence data. We recognize this pandemic is evolving, so we’ll monitor the situation and extend the offer as needed.”

Rescale Partners with Google Cloud and Azure to Offer Cloud HPC for COVID-19 Researchers

Today Rescale, in cooperation with Google Cloud and Microsoft Azure, announced a new program that immediately offers high performance computing resources at no cost to teams working to develop test kits and vaccines for COVID-19. “Those working on coronavirus vaccines and testing who would benefit from HPC in the cloud at no cost should apply at techagainstcovid.com. Researchers can rapidly run simulations in the cloud without setup time or IT teams using Rescale’s turnkey platform combined with cloud computing resources from Google Cloud Platform and Microsoft Azure.”

Alibaba Cloud Offers AI Cloud Services to Help Battle COVID-19 Globally

Today the Alibaba Cloud announced it has offered medical personnel around the world a set of advanced cloud-based technology applications in the fight against the COVID-19 pandemic. Included are artificial intelligence-enhanced innovations based on learnings and insights garnered during the initial outbreak of the virus. “The series of cloud-native anti-coronavirus solutions stem from joint efforts of Alibaba Cloud’s solution experts, scientists and researchers from Alibaba DAMO Academy and the technical team at DingTalk, one of the platforms UNESCO has tabbed as facilitating distance learning during the coronavirus outbreak.”

Qumulo Offers Free Cloud Software to help Fight the COVID-19 Outbreak

Today Qumulo announced it is offering its cloud-native file software, for free, to public and private sector medical and healthcare research organizations that are working to minimize the spread and impact of the COVID-19 virus. “Using Qumulo’s software to manage and understand petabytes of data real-time, medical and research organizations around the world can work together and leverage the power of the cloud and hybrid environments to fight COVID-19,” said Bill Richter, president and CEO of Qumulo.