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New Cray Cluster Connect Puts the Super in Big Data

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This week at ISC’13, we learned about the new Cray Cluster Connect. Described as a complete Lustre storage solution for x86 Linux clusters, Cray Cluster Connect is an “hardware agnostic” solution for customers who need flexibility in their storage configurations. In other words, you no longer need to buy a Cray supercomputer in order to get access to Cray’s Big Data and fast I/O expertise.

Cray has a long, rich history in the HPC storage space, and we have built some of the largest and fastest Lustre file systems in the world,” said Barry Bolding, Cray’s vice president of storage and data management. “With Cray Cluster Connect, we are applying our Lustre expertise and innovation, and taking all that we have learned, developed and invested in parallel storage solutions to an expanded customer base. We can now deliver end-to-end, Lustre storage solutions for customers’ existing x86 Linux environments. With the launch of Cray Cluster Connect, our storage and data management solutions are no longer limited to Cray supercomputer customers.”

Available now, Cray Cluster Connect offers a wide range of storage options including block storage components from Cray Sonexion (Xyratex), DataDirect Networks, or NetApp plus a full set of management and storage connectivity tools for data movement, archiving and management. Read the Full Story.

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Posted in Events, HPC, HPC Hardware, HPC Software, ISC13, Lustre, Storage, Video | Leave a comment

Altair Chosen for JAIST Research Center in Japan

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Altair’s workload management product, PBS Professional, has been selected to manage workload for the Cray XC30 supercomputer recently put into production by the Japan Advanced Institute for Science and Technology (JAIST).

One of Japan’s premier academic research centres, JAIST is using the new Cray XC30 supercomputer for research into massively parallel programming and a variety of scientific pursuits.

The two-cabinet Cray XC30 supercomputer at JAIST has a peak performance of more than 118 teraflops with 5760 CPU cores and is the institute’s main system for its high-performance computing facility.

At JAIST, it is imperative to provide our world-class scientists with the best available technology resources to support their computational research,’ said Mineo Kaneko, director of the JAIST Research Center for Advanced Computing Infrastructure. “The pioneering Cray XC30 supercomputer with PBS Professional will allow our users to expand the scope of their research efforts with a proven, well-integrated solution they can rely on.”

This story appears here as part of a cross-publishing agreement with Scientific Computing World.

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Podcast: Radio Free HPC Interviews Jack Dongarra on the New TOP500

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In this podcast, the Radio Free HPC team discusses the June 2013 TOP500 list with Jack Dongarra from the University of Tennessee. How did the Chinese manage to trump the world once again with the #1 supercomputer on the planet? Listen in to find out.

Download the MP3 * Subscribe on iTunes * RSS Feed

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Excitement at ISC13: Getting to the MilkyWay 2

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In this special guest feature, Intel’s John Hengeveld describes the effort that went into building the fastest supercomputer on Earth.

Milky Way 2 is amazing.. and whats more amazing is… you can build a similar system for your needs.

So by now you have all heard about the MilkyWay 2 system in China that has surprised the world and achieved the #1 spot on the TOP500 list. The Intel team has been working on many fronts in the past year.  The upcoming Intel Xeon Processors E5-2600 V2, a major expansion to the Intel Xeon Phi products family, expanding our industry leading software development toolkits.  We’re in like 98% of the new systems on the TOP500 list.. so seriously.. we need a rest.

All of these things are coming together at ISC13.  The outgrowth of much of this work is shows up in the MilkyWay 2 system, but what’s more important is that this technology is very soon available from a broad range of suppliers to be turned on a wide range of industrial and scientific technical computing applications.

The Processor and Coprocessor components Intel proposed and shipped in production for MilkyWay2 are being announced and demonstrated by Intel for the first time at ISC today. The first demonstration of the as yet unlaunched Intel Xeon Processor E5-2600 V2 product family will be shown in the Intel Booth in a live 52 node cluster showing high fidelity visualizations of an Audi RS5 vehicle design.

During ISC’13, Raj Hazra announced the general availability of 5 new Intel Xeon Phi Coprocessor products including the 3100 family that is featured in the MilkyWay 2 system. You can watch the video right here on insideHPC.

I want to tell a short story about the MilkyWay 2 system that you probably haven’t heard, and show why being at Intel is the coolest thing ever.

About a year ago, the NUDT folks, led by Professor Liao, had a really good idea of how he wanted to build the worlds biggest super computer, using the next step in their proprietary fabric and trying to use intel’s latest processors to achieve its objectives in power efficiency and performance.

They gave Intel and others programmability, node power and node performance goals with very tight constraints.  Then they dropped the heavy challenge… “and it all has to work and be #1 in the world by June 2013”.  Intel proposed a solution that not only met all their time and performance requirements but also their programmability requirements.

What they wanted they later described as a “Neo-Heterogeneous Architecture”. This type of system has two tiers of hardware heterogeneity, but driven off a consistent programming model and parallelism abstraction. This allows very much faster development of applications that scale to a very high level.

What the use of Intel Xeon Phi Coprocessors offered is hardware with the performance and energy efficiency required, but removed the need for an alternate programming model for the second tier thus enabling their neo-heterogeneous architectural vision.

The plan to build out the system as audacious as well.  The customer developed the system based on Intel Xeon Processor E5-2600 based products and built test cluster that would itself be on the top500 list.  After debugging that system and the code that ran on it, NUDT planned to get the next generation product (the future Intel Xeon Processor E5-2600 V2 family) and basically drop it in.  This enabled them to go from first delivery of a blade to a completed system in about 4 weeks.  The Linpack run came about a week later.  By the time Jack Dongarra and others saw it at the end of May, it was running real applications.

For Intel’s part, what Intel’s factory and engineering teams did was validate two new products and put them into high volume production on schedule to within a week of  our schedule predicted a year before.

I have been getting asked why Intel got chosen for this amazing system. The short answer is.. because we deliver.  We delivered.

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Posted in Business of HPC, Co-processors, Compute, HPC, HPC Hardware, TOP500 | Leave a comment

It’s Official: China Once Again Leads the TOP500

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The June 2013 TOP500 was released today at ISC’13 with an all-new Chinese supercomputer leading the list with 33.86 Petaflops on the Linpack benchmark.

Tianhe-2, or Milky Way-2, will be deployed at the National Supercomputer Center in Guangzho, China, by the end of the year. The surprise appearance of Tianhe-2, two years ahead of the expected deployment, marks China’s first return to the No. 1 position since November 2010, when Tianhe-1A was the top system. Tianhe-2 has 16,000 nodes, each with two Intel Xeon IvyBridge processors and three Xeon Phi processors for a combined total of 3,120,000 computing cores.

Formerly number one on the list, the Titan Cray XK7 at Oak Ridge is now ranked No. 2 with 17.59 Petaflops and Sequoia, an IBM BlueGene/Q system installed at LLNL falls to number 3 on the list with 17.17 petaflops.

Other highlights from the June 2013 TOP500 list include:

  • There are 26 systems with performance greater than a Petaflop, up from 23 six months ago.
  • The new No. 1 system, Tianhe-2, and the No. 6 system, Stampede, are using Intel Xeon Phi processors to speed up their computational rate. The No. 2 system, Titan, and the No. 10 system, Tianhe-1A, are using NVIDIA GPUs to accelerate computation.
  • A total of 54 systems on the list are using accelerator/co-processor technology, down from 62 in November 2012. Thirty-nine of these use NVIDIA chips, three use ATI Radeon, and eleven systems use Intel MIC technology (Xeon Phi).
  • The number of systems installed in China has now stabilized at 66, with 72 and 68 on the last two lists. As a nation, China now holds the No. 2 position as a user of HPC, ahead of Japan, UK, France, and Germany. Due to Tianhe-2, China has also taken the No. 2 position in the performance share, ahead of Japan.
  • Intel continues to provide the processors for the largest share (80.4 percent) of TOP500 systems.

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nCore HPC Rolls Out BrownDwarf ARM DSP Supercomputer

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We don’t get the chance to announce new players in the HPC space very often, especially from our hometown of Portland. Today newcomers nCore HPC announced the BrownDwarf Y-class supercomputer, a heterogeneous ARM- and DSP-based system designed for green high performance computing.

With its unique parallel computing architecture and a high performance, low latency interconnect, the BrownDwarf is “Y-Class supercomputer” with extremely low power consumption. In a 144 node configuration, BrownDwarf delivers 70 Teraflops of performance at 10kw inside a 42U high rack.

The BrownDwarf Y-Class system is an incredibly important milestone in HPC system development,” said Ian Lintault, managing director of nCore HPC. “Working in close collaboration with TI, IDT and our hardware partner Prodrive, we have successfully established a new class of energy efficient supercomputers designed to fulfill the demands of a wide range of scientific, technical and commercial applications.”

The BrownDwarf Y-Class node leverages multiple Keystone-II and Keystone-I SoC components from Texas Instruments Incorporated (TI). Each node integrates four ARM Cortex-A15 MPCore processors, 24 TMS320C66x digital signal processor (DSP) cores and 26GB of ECC memory.

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Gordon Supercomputer Fosters New Fields of Research for HPC

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With over 300 TB of high performance Intel flash memory SSD, the Gordon supercomputer at SDSC is opening the door to new areas of research for HPC such as political science, mathematical anthropology, finance, and even the cinematic arts.

Gordon’s extraordinary speed makes it possible for researchers to tackle questions they couldn’t address before, simply because they didn’t have a system that was uniquely tailored to handle the challenges of data intensive computing,” said SDSC Michael Norman just prior to Gordon’s launch. “I view Gordon as a new kind of vessel, a ship that will take us on new voyages to makes new discoveries in new areas of science.”

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Livermore to Share 5 Petaflops with Industry

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Over at FCW Magazine, Mark Rockwell writes that Lawrence Livermore National Labs has five petaflops of computing power it wants to share. To help fuel technological innovation to spur U.S. economic competitiveness, the research facility has officially opened up access to its massive Vulcan supercomputer to industry and academia for collaborative developmental projects.

High performance computing is a key to accelerating the technological innovation that underpins U.S. economic vitality and global competitiveness,” said Fred Streitz, HPC Innovation Center director, in a June 11 statement. “Vulcan offers a level of computing that is transformational, enabling the design and execution of studies that were previously impossible, opening opportunities for new scientific discoveries and breakthrough results for American industries.”

During its initial shakeout period, LLNL said Vulcan was combined with the larger Sequoia system to produce set a world speed record of 504 billion events per second for a discrete event simulation in collaboration with the Rensselaer Polytechnic Institute. That achievement, said the lab, opens the way for the scientific exploration of complex, planetary-sized systems.

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MEGWARE Sponsors Local Team at ISC’13 Student Cluster Challenge

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When it comes to Student Cluster Competitions, is there such a thing as a home team advantage? A team of six Chemnitz students will battle it out with eight other teams in the ISC’13 Student Cluster Challenge. The team calls themselves “TurboTUC” and their roster includes some students with pure science backgrounds in areas such as chemistry and theoretical physics to go along with their computer-related smarts.

The challenge for us is firstly to create high-performance hardware and then use the right components,” says team member Sebastian Siegert. “In addition, we will only find out about part of the applications at the fair itself – then the task will be to discover whether – and how well – we can adapt these with our supercomputer in order to solve the problem as quickly and with the greatest energy efficiency as possible,” adds Henrik Kretzschmar.

Read the Full Story or check out more Team profiles at the Student Cluster Competition Blog.

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Titan Completes Acceptance Testing

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This week the Titan supercomputer at ORNL completed rigorous acceptance testing to ensure the functionality, performance and stability of the machine, one of the world’s most powerful supercomputing systems for open science. As the fastest supercomputer in the world in the November 2012 TOP500, Titan is a Cray XK7 supercomputer comprises 18,688 NVIDIA Tesla GPUs, 299,008 AMD Opteron CPU cores, and 710 terabytes of memory.

The real measure of a system like Titan is how it handles working scientific applications and critical scientific problems,” said Buddy Bland, project director at the Oak Ridge Leadership Computing Facility. “The purpose of Titan’s incredible power is to advance science, and the system has already shown its abilities on a range of important applications and has validated ORNL’s decision to rely on GPU accelerators.”

According to reports in KnoxNews, the Titan system acceptance was delayed due to a problem with faulty solder connections at the pc board level, which required extensive rework by Cray. Read the Full Story.

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STFC to Develop Hybrid Supercomputer Applications

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The Science and Technology Facilities Council (STFC) at Daresbury in the U.K. has entered an agreement with Nvidia to help develop software for next-generation hybrid supercomputers.

This agreement combines NVIDIA’s leading-edge GPU accelerator technologies and HPC expertise with STFC’s software development expertise,” said David Corney, acting director of STFC’s Department of Scientific Computing. “This unique combination will enable the development of next-generation massively parallel applications, which will be used for exascale performance levels, or a thousand times more powerful than Blue Joule at STFC, the most powerful computer in the UK today.”

The collaboration will offer scientists access to one of the largest software development laboratories in the world, STFC’s Hartree Centre at Daresbury Laboratory, which is dedicated to modelling and simulation software, as well as to Nvidia’s expertise. Read the Full Story.

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ClusterVision Pumps Up Supercomputer Muscles in Brussels

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ClusterVision has announced the successful completion of a new cluster installation project at the Université Libre de Bruxelles (ULB). With cluster design, build and service projects already completed at the Université Catholique de Louvain, and the Université de Liège, the new installation at the Université Libre de Bruxelles continues ClusterVision’s recent history of engagement with universities in the Wallonia region, and also its successful partnership with Dell and others.

The new CÉCI cluster to be installed at the ULB had to feature a very high number of cores interconnected with an InfiniBand network and with a well-balanced storage system to allow fast IO response to the CPU load while enabling high capacity expansions,” said Raphael Leplae ULB, Computing Centre, operations/HPC manager. “ClusterVision proposed a unique combination of hardware and software components matching exactly our needs. This new cluster installation will enable researchers requiring HPC solutions, such as earth-level simulations, bioinformatics and other big data-related analysis, to move towards more ambitious projects and/or be more competitive at the international level.”

ClusterVision worked with system engineers at ULB to design and install a combination of HPC technologies from partners including Dell, Supermicro, AMD, Nvidia, Qlogic, GPFS, and Bright Computing. The compute density and performance characteristics are achieved through the addition of 42 Dell PowerEdge M915 Blade Servers, each with four AMD Opteron 6272 CPUs and 256GB of RAM. Selecting the AMD Opteron 6200 series ‘Interlagos’ 16-core processors allowed engineers at ClusterVision to achieve the scaled performance but keeping within the requirements for density and energy efficiency. Additional compute power is provided by two Nvidia Tesla M2090 GPUs, housed in a Supermicro chassis, also with AMD Opteron 6200 processors.

The system incorporates both high- and mid-range storage expansion based on Dell PowerVault. High-range storage is expanded by Dell PowerVault MD3220 with 24x 900GB SAS 10K RPM. The mid-range storage expansion of 40TB is achieved via one Dell PowerVault MD3200 and two Dell PowerVault MD1200 units. Network connectivity is primarily provided by Qlogic Infinipath QLE7340 and Qlogic QLA12200 switches.

To complete the system, ClusterVision included a full software environment, including IBM’s high performance shared file system, GPFS (General Parallel File System) – an innovative solution for non-IBM storage, and Advanced Version licences of Bright Cluster Manager from Bright Computing. Bright Cluster Manager was used for the installed Linux environment, initial provisioning and configuration of the cluster components and is also the base platform for the day-to-day operational management of the system.

This story appears here as part of a cross-publishing agreement with Scientific Computing World.

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Cray Rolls Out Hadoop Cluster Solution

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Today Cray announced a new Hadoop solution that combines supercomputing technologies with an “enterprise-strength” approach to Big Data analytics. Available later this month, Cray cluster supercomputers for Hadoop will pair Cray CS300 systems with the Intel Distribution for Apache Hadoop.

More and more organizations are expanding their usage of Hadoop software beyond just basic storage and reporting. But while they’re developing increasingly complex algorithms and becoming more dependent on getting value out of Hadoop systems, they are also pushing the limits of their architectures,” said Bill Blake, senior vice president and CTO of Cray. “We are combining the supercomputing technologies of the Cray CS300 series with the performance and security of the Intel Distribution to provide customers with a turnkey, reliable Hadoop solution that is purpose-built for high-value Hadoop environments. Organizations can now focus on scaling their use of platform-independent Hadoop software, while gaining the benefits of important underlying architectural advantages from Cray and Intel.”

As you may recall, Cray acquired the CS300 cluster technology from Appro last year. This gives the company a more affordable cluster offering for markets that don’t require Cray’s low latency interconnect technology. Read the Full Story.

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New TotalView Release Optimizes Code for Intel Xeon Phi

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Today Rogue Wave Software rolled out a new version of their TotalView debugger featuring support for the Intel Xeon Phi coprocessor, Cray XC30 series supercomputers, and Apple OS X Lion and Mountain Lion platforms.

TotalView is a useful tool for optimizing code in our movement towards increasingly advanced and complex architectures. For codes developed on the Intel Xeon Phi coprocessor and other future architectures, thread control is going to be a particularly critical feature, and it is one that Rogue Wave’s TotalView offers,” stated Richard Barrett, Principal Member of the Technical Staff and leader of the Application Performance Modeling and Analysis Team within the Extreme-scale computing group at Sandia National Laboratories. “The consistency of TotalView 8.12 with previous versions meant that there was a quick learning curve for our teams.”

Deployed successfully at a number of strategic customer sites over the past six months, the early-access version of TotalView 8.12 has already helped a number of supercomputer centers port their codes to Intel Xeon Phi including the National Institute for Computational Sciences (NICS) and Sandia National Laboratories.

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Slidecast: Rogue Wave Software for Developing Parallel, Data-intensive Applications

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In this slidecast, Scott Lasica from Rogue Wave Software describes how the company helps its customers meet the challenges of programming at extreme scale.

Developing parallel, data-intensive applications is hard. We make it easier. Rogue Wave works with many scientists performing cutting-edge research and solving Grand Challenge class problems at labs and supercomputer facilities around the world. Time and again, scientists tell us that TotalView provides them with the advanced functionality that makes it possible to quickly fix even complex bugs.”

To learn more about Rogue Wave Software, check out their booth #550 at ISC’13.

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Posted in HPC, HPC Software, inside-BigData, Podcast, Rich Report, Tools, Totalview | Leave a comment

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